Postdoc in developing new long-read DNA sequence analysis workflows to study plant transposable elements (Bioinformatics, molecular biology)

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Postdoc in developing new long-read DNA sequence analysis workflows to study plant transposable elements (Bioinformatics, molecular biology)

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Job description

Offer DescriptionWe are recruiting a postdoctoral researcher for a grant-funded project that integrates new genomics and proteomics technologies to discover how helitron transposons are activated and replicate in plants. You will also be given the freedom to develop your own research projects within the broader theme of the project. We have previously developed a long-read sequencing method called CIDER-Seq including a new sequence analysis pipeline to profile extra-chromosomal circular DNA (Mehta et al., 2020, Nature Protocols). In this project we aim to create a more quantitative and scalable data analysis system to analyse long-read sequence data generated by CIDER-Seq in order to discover the roles of helitrons in creating new genetic variation in plants. In the long-term, this project seeks to create a system for programmable activation of helitrons to provide a new route to creating new crop germplasm. This project will equip you with a diverse skillset and experience well suited for both academic and industrial R&D careers. You will also be provided with mentorship by a team of senior and junior PIs with extensive professional networks in Europe, North America, and Asia in both academia and industry (including biological software companies) to help you achieve your professional career goals.Where to apply WebsiteRequirementsResearch Field Biological sciences Education Level PhD or equivalentLanguages ENGLISH Level GoodAdditional InformationBenefitsWe offer you a full-time postdoctoral scholarship position for up to 3 years, pending a positive evaluation at the end of the first year.
You will obtain advanced training in plant biology, genetic engineering, systems biology, and professional development that will prepare you for a career in academic research. You will be closely mentored by Profs. Mehta and Vanderschuren as well as a close-knit, international, and diverse community of plant scientists within the Division of Crop Biotechnics. You will be given support to participate in European and international conferences and publish your science in respected scientific journals. The host labs also support the principles of equity, diversity, and inclusion, and embrace Open Science ( ).Eligibility criteriaWe seek a candidate with a PhD in Biology, Bioinformatics, Computational Biology, Biochemistry, Synthetic Biology, Bioengineering, Biotechnology or other relevant topic for the projects described above. A successful candidate will ideally:• Demonstrate a strong ability to write and communicate in English in the form of a well-written PhD thesis and/or at least one published, accepted, or pre-printed publication as lead author.• Be eager to apply for an independent postdoc fellowship and research grants with the support of the PIs.• Have experience in biological data analysis software development and or advanced -omics data analysis.• High-level programming or data-analysis skills including proficiency in Python or similar programming languages demonstrated by published software projects (e.g., public GitHub repos etc.).• Be able to work well in a multi-disciplinary team.• Be able to integrate in an international and diverse working environment.The anticipated start date is highly flexible within 2025.Selection processFor more information please contact Prof. dr. Hervé Vanderschuren, tel.: +32 16 37 62 45, mail: or Prof. dr. Devang Mehta, tel.: +32 16 37 21 46, mail: .
You can apply for this job no later than 15/05/2025 via theWork Location(s)Number of offers available 1 Company/Institute KU Leuven Country Belgium State/Province Vlaams Brabant City Leuven Postal Code 3000 Street Leuven GeofieldContact State/ProvinceLeuven CityVlaams Brabant StreetLeuven Postal Code3000 E-Mail[email protected]STATUS: EXPIREDShare this page

Expected salary

Location

Louvain, Brabant Flamand

Job date

Fri, 14 Feb 2025 04:23:55 GMT

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